Monthly Archives

June 2015

Rancho BioSciences Donates GWAS ETL Loader Scripts and Documentation to the tranSMART Foundation

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San Diego, CA – June 16th, 2015 – Rancho BioSciences, The Data Curation Company, announced it has donated GWAS (Genome Wide Association Studies) ETL (Extract, Transform and Load) scripts and documentation for tranSMART v 1.2 Oracle to Github. Rancho worked in collaboration with two major pharmaceutical companies to make this happen. A script was developed for the latest version of tranSMART which performs indexing for the improved performance of the Genome Wide Association Visual Analyzer (GWAVA), tranSMART’s interactive Manhattan plotter developed by Peter Henstock of Pfizer. With the new scripts, Rancho improved the speed of the search queries so that…

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Reconstitution of the ERG Gene Expression Network Reveals New Biomarkers and Therapeutic Targets in ERG Positive Prostate Tumors.

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Dubovenko A1, Serebryiskaya T1, Nikolsky Y1, Nikolskaya T2, Perlina A1, JeBailey L3, Bureeva S1, Katta S4, Srivastava S4, Dobi A4, Khasanova T5. Author information 1. Thomson Reuters, IP & Science, 5901 Priestly Dr., 200, Carlsbad, CA 92008, USA; 2. 29608 Via Rancheros, Fallbrook, CA 92028, USA; 3. Novartis Institute for Biomedical Research, 250 Massachusets Ave, Cambridge, MA, USA; 4. Center for Prostate Cancer Research, Department of Surgery, Uniformed Services University of the Health Sciences, Bethesda, MD 20814, USA; 5. Rancho Biosciences, PO Box 7208, Rancho Santa Fe, CA, 92067, USA. Abstract BACKGROUND: Despite a growing number of studies evaluating cancer…

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